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Articles (99)

# Публикация
21 Sofya I Scherbinina , Philip V Toukach
Three-Dimensional Structures of Carbohydrates and Where to Find Them
International Journal of Molecular Sciences. 2020. V.21. N20. 7702 . DOI: 10.3390/ijms21207702 WOS Scopus OpenAlex
22 Stroylov V. , Panova M. , Toukach P.
Comparison of Methods for Bulk Automated Simulation of Glycosidic Bond Conformations
International Journal of Molecular Sciences. 2020. V.21. N20. 7626 . DOI: 10.3390/ijms21207626 WOS Scopus OpenAlex
23 Shakhmatov E.G. , Toukach P.V. , Makarova E.N.
Structural studies of the pectic polysaccharide from fruits of Punica granatum
Carbohydrate Polymers. 2020. V.235. 115978 . DOI: 10.1016/j.carbpol.2020.115978 WOS Scopus OpenAlex
24 Egorova K.S. , Smirnova N.S. , Toukach P.V.
CSDB_GT, a curated glycosyltransferase database with close-to-full coverage on three most studied nonanimal species
Glycobiology. 2020. V.31. N5. P.524-529. DOI: 10.1093/glycob/cwaa107 WOS Scopus OpenAlex
25 Toukach P.V. , Egorova K.S.
New Features of Carbohydrate Structure Database Notation (CSDB Linear), As Compared to Other Carbohydrate Notations
Journal of Chemical Information and Modeling. 2020. V.60. N3. P.1276-1289. DOI: 10.1021/acs.jcim.9b00744 WOS Scopus OpenAlex
26 Sizova O.V. , Shashkov A.S. , Toukach P.V. , Knirel Y.A. , Shaikhutdinova R.Z. , Ivanov S.A. , Kislichkina A.A. , Dentovskaya S.V.
Structure elucidation and gene cluster characterization of the O-antigen of Yersinia kristensenii С-134
Carbohydrate Research. 2019. V.481. P.9-15. DOI: 10.1016/j.carres.2019.06.001 WOS Scopus OpenAlex
27 Neelamegham S. , Aoki-Kinoshita K. , Bolton E. , Frank M. , Lisacek F. , Lütteke T. , O’Boyle N. , Packer N. , Stanley P. , Toukach P. , Varki A. , Woods R.J. , Darvill A. , Dell A. , Henrissat B. , Bertozzi C. , Hart G. , Narimatsu H. , Freeze H. , Yamada I. , Paulson J. , Prestegard J. , Marth J. , Vliegenthart J.F.G. , Etzler M. , Aebi M. , Kanehisa M. , Taniguchi N. , Edwards N. , Rudd P. , Seeberger P. , Mazumder R. , Ranzinger R. , Cummings R. , Schnaar R. , Perez S. , Kornfeld S. , Kinoshita T. , York W. , Knirel Y.
Updates to the Symbol Nomenclature for Glycans guidelines
Glycobiology. 2019. V.29. N9. P.620-624. DOI: 10.1093/glycob/cwz045 WOS Scopus OpenAlex
28 Sigida E.N. , Fedonenko Y.P. , Shashkov A.S. , Toukach P.V. , Shelud'ko A.V. , Zdorovenko E.L. , Knirel Y.A. , Konnova S.A.
Structural studies of O-specific polysaccharide(s) and biological activity toward plants of the lipopolysaccharide from Azospirillum brasilense SR8
International Journal of Biological Macromolecules. 2019. V.126. P.246-253. DOI: 10.1016/j.ijbiomac.2018.12.229 WOS Scopus OpenAlex
29 Sizova O.V. , Shashkov A.S. , Dmitrenok A.S. , Toukach P.V. , Knirel Y.A. , Shaikhutdinova R.Z. , Ivanov S.A. , Kislichkina A.A. , Bogun A.G. , Dentovskaya S.V.
Structure and gene cluster of the O-polysaccharide of Yersinia rohdei H274-36/78
International Journal of Biological Macromolecules. 2019. V.122. P.555-561. DOI: 10.1016/j.ijbiomac.2018.10.189 WOS Scopus OpenAlex
30 Egorova K.S. , Knirel Y.A. , Toukach P.V.
Expanding CSDB_GT glycosyltransferase database with Escherichia coli
Glycobiology. 2019. V.29. N4. P.285-287. DOI: 10.1093/glycob/cwz006 WOS Scopus OpenAlex
31 Alocci D. , Suchánková P. , Costa R. , Hory N. , Mariethoz J. , Vařeková R.S. , Toukach P. , Lisacek F.
SugarSketcher: Quick and Intuitive Online Glycan Drawing
Molecules. 2018. V.23. N12. 3206 . DOI: 10.3390/molecules23123206 WOS Scopus OpenAlex
32 Chernyshov I.Y. , Toukach P.V.
REStLESS: automated translation of glycan sequences from residue-based notation to SMILES and atomic coordinates
Bioinformatics. 2018. V.34. N15. P.2679-2681. DOI: 10.1093/bioinformatics/bty168 WOS Scopus OpenAlex
33 Egorova K.S. , Toukach P.V.
Glycoinformatics: Bridging Isolated Islands in the Sea of Data
Angewandte Chemie International Edition. 2018. V.57. N46. P.14986-14990. DOI: 10.1002/anie.201803576 WOS Scopus OpenAlex
34 Kapaev R.R. , Toukach P.V.
GRASS: semi-automated NMR-based structure elucidation of saccharides
Bioinformatics. 2017. V.34. N6. P.957-963. DOI: 10.1093/bioinformatics/btx696 WOS Scopus OpenAlex
35 Egorova K.S. , Toukach P.V.
CSDB_GT: a new curated database on glycosyltransferases
Glycobiology. 2017. V.27. N4. P.285-290. DOI: 10.1093/glycob/cww137 WOS Scopus OpenAlex
36 Egorova K.S. , Toukach P.V.
Carbohydrate Structure Database (CSDB): Examples of Usage
In compilation A Practical Guide to Using Glycomics Databases. – Springer Tokyo., 2016. – C.75-113. – ISBN 978-4-431-56454-6. DOI: 10.1007/978-4-431-56454-6_5 OpenAlex
37 Toukach P.V. , Egorova K.S.
Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts
Nucleic Acids Research. 2016. V.44. ND1. P.D1229-D1236. DOI: 10.1093/nar/gkv840 WOS Scopus OpenAlex
38 Kapaev R.R. , Toukach P.V.
Simulation of 2D NMR Spectra of Carbohydrates Using GODESS Software
Journal of Chemical Information and Modeling. 2016. V.56. N6. P.1100-1104. DOI: 10.1021/acs.jcim.6b00083 WOS Scopus OpenAlex
39 Kapaev R.R. , Toukach P.V.
Improved Carbohydrate Structure Generalization Scheme for 1H and 13C NMR Simulations
Analytical Chemistry. 2015. V.87. N14. P.7006-7010. DOI: 10.1021/acs.analchem.5b01413 WOS Scopus OpenAlex
40 Varki A. , Cummings R.D. , Aebi M. , Packer N.H. , Seeberger P.H. , Esko J.D. , Stanley P. , Hart G. , Darvill A. , Kinoshita T. , Prestegard J.J. , Schnaar R.L. , Freeze H.H. , Marth J.D. , Bertozzi C.R. , Etzler M.E. , Frank M. , Vliegenthart J.F. , Lütteke T. , Perez S. , Bolton E. , Rudd P. , Paulson J. , Kanehisa M. , Toukach P. , Aoki-Kinoshita K.F. , Dell A. , Narimatsu H. , York W. , Taniguchi N. , Kornfeld S.
Symbol Nomenclature for Graphical Representations of Glycans
Glycobiology. 2015. V.25. N12. P.1323-1324. DOI: 10.1093/glycob/cwv091 WOS Scopus OpenAlex

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