1
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Kasimova A.A.
, Shashkov A.S.
, Shneider M.M.
, Sheck E.A.
, Mikhailova Y.V.
, Shelenkov A.A.
, Popova A.V.
, Knirel Y.A.
, Kenyon J.J.
The Acinetobacter baumannii K239 capsular polysaccharide includes heptasaccharide units that are structurally related to K86 but joined by different linkages formed by different Wzy polymerases
International Journal of Biological Macromolecules. 2024.
130045
. DOI: 10.1016/j.ijbiomac.2024.130045
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2
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Arbatsky N.P.
, Kasimova A.A.
, Shashkov A.S.
, Shneider M.M.
, Popova A.V.
, Perepelov A.V.
, Hall R.M.
, Kenyon J.J.
, Knirel Y.A.
Revised structure of the polysaccharide from Acinetobacter baumannii LUH5551 assigned as the K63 type capsular polysaccharide
Carbohydrate Research. 2024.
V.535. 109020
. DOI: 10.1016/j.carres.2023.109020
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3
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Kasimova A.A.
, Kolganova A.S.
, Shashkov A.S.
, Shneider M.M.
, Mikhailova Y.V.
, Shelenkov A.A.
, Popova A.V.
, Knirel Y.A.
, Perepelov A.V.
, Kenyon J.J.
Structure of the K141 capsular polysaccharide produced by Acinetobacter baumannii isolate KZ1106 that carries KL141 at the chromosomal K locus
Carbohydrate Research. 2024.
V.538. 109097
:1-1. DOI: 10.1016/j.carres.2024.109097
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4
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Evseev P.V.
, Shneider M.M.
, Kolupaeva L.V.
, Kasimova A.A.
, Timoshina O.Y.
, Perepelov A.V.
, Shpirt A.M.
, Shelenkov A.A.
, Mikhailova Y.V.
, Suzina N.E.
, Knirel Y.A.
, Miroshnikov K.A.
, Popova A.V.
New Obolenskvirus Phages Brutus and Scipio: Biology, Evolution, and Phage-Host Interaction
International Journal of Molecular Sciences. 2024.
V.25. N4. 2074
. DOI: 10.3390/ijms25042074
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5
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Evseev P.
, Gutnik D.
, Evpak A.
, Kasimova A.
, Miroshnikov K.
Origin, Evolution and Diversity of φ29-like Phages—Review and Bioinformatic Analysis
International Journal of Molecular Sciences. 2024.
V.25. N19. 10838
. DOI: 10.3390/ijms251910838
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6
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Arbatsky N.P.
, Shashkov A.S.
, Shneider M.M.
, Mikhailova Y.V.
, Shelenkov A.A.
, Sheck E.A.
, Kasimova A.A.
, Kalinchuk N.A.
, Kenyon J.J.
, Knirel Y.A.
The K129 capsular polysaccharide produced by Acinetobacter baumannii MAR 15-4076 has the same composition as K84 but differs in the linkage between units altering the overall branching topology
Carbohydrate Research. 2024.
V.545. 109273
. DOI: 10.1016/j.carres.2024.109273
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7
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Shashkov A.S.
, Arbatsky N.P.
, Senchenkova S.N.
, Kasimova A.A.
, Dmitrenok A.S.
, Shneider M.M.
, Knirel Y.A.
, Hall R.M.
, Kenyon J.J.
Characterization of the carbapenem-resistant Acinetobacter baumannii clinical reference isolate BAL062 (CC2:KL58:OCL1): resistance properties and capsular polysaccharide structure
mSystems. 2024.
V.9. N10. e00941-24
. DOI: 10.1128/msystems.00941-24
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8
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Kasimova A.A.
, Shashkov A.S.
, Perepelov A.V.
, Babich T.
, Demina L.
, Popova N.
, Krivonos D.
, Safonov A.
Structure elucidation and gene cluster of the O-antigen of Shewanella xiamenensis strain DCB-2-1 containing an amide of d-glucuronic acid with d-alanine and its bonding with U, Cr and V
International Journal of Biological Macromolecules. 2023.
127546
:1-10. DOI: 10.1016/j.ijbiomac.2023.127546
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9
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Timoshina O.Y.
, Kasimova A.A.
, Shneider M.M.
, Arbatsky N.P.
, Shashkov A.S.
, Shelenkov A.A.
, Mikhailova Y.V.
, Popova A.V.
, Hall R.M.
, Knirel Y.A.
, Kenyon J.J.
Loss of a Branch Sugar in the Acinetobacter baumannii K3-Type Capsular Polysaccharide Due To Frameshifts in the gtr6 Glycosyltransferase Gene Leads To Susceptibility To Phage APK37.1
Microbiology spectrum. 2023.
V.11. N1. DOI: 10.1128/spectrum.03631-22
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10
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Kasimova A.A.
, Shneider M.M.
, Evseev P.V.
, Shelenkov A.A.
, Mikhailova Y.V.
, Miroshnikov K.A.
, Chebotar I.V.
, Shagin D.A.
The structure of Klebsiella pneumoniae K108 capsular polysaccharide is similar to Escherichia coli colanic acid
International Journal of Biological Macromolecules. 2023.
V.244. 125403
. DOI: 10.1016/j.ijbiomac.2023.125403
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11
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Timoshina O.Y.
, Kasimova A.A.
, Shneider M.M.
, Matyuta I.O.
, Nikolaeva A.Y.
, Evseev P.V.
, Arbatsky N.P.
, Shashkov A.S.
, Chizhov A.O.
, Shelenkov A.A.
, Mikhaylova Y.V.
, Slukin P.V.
, Volozhantsev N.V.
, Boyko K.M.
, Knirel Y.A.
, Miroshnikov K.A.
, Popova A.V.
Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii
International Journal of Molecular Sciences. 2023.
V.24. N10. 9100
. DOI: 10.3390/ijms24109100
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12
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Lukianova A.A.
, Shneider M.M.
, Evseev P.V.
, Egorov M.V.
, Kasimova A.A.
, Shpirt A.M.
, Shashkov A.S.
, Knirel Y.A.
, Kostryukova E.S.
, Miroshnikov K.A.
Depolymerisation of the Klebsiella pneumoniae Capsular Polysaccharide K21 by Klebsiella Phage K5
International Journal of Molecular Sciences. 2023.
V.24. N24. 17288
. DOI: 10.3390/ijms242417288
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13
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Knirel Y.A.
, Kasimova A.A.
, Arbatsky N.P.
, Shneider M.M.
, Popova A.V.
, Brovko F.A.
, Shashkov A.S.
, Senchenkova S.N.
, Perepelov A.V.
, Shpirt A.M.
5,7-Diamino-3,5,7,9-tetradeoxynon-2-ulosonic Acids in the Capsular Polysaccharides of Acinetobacter baumannii
Biokhimiya. 2023.
V.88. N2. P.202-210. DOI: 10.1134/s0006297923020049
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14
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Shashkov A.S.
, Kasimova A.A.
, Arbatsky N.P.
, Senchenkova S.N.
, Perepelov A.V.
, Dmitrenok A.S.
, Chizhov A.O.
, Knirel Y.A.
, Shneider M.M.
, Popova A.V.
, Kenyon J.J.
Complete chemical structure of the K135 capsular polysaccharide produced by Acinetobacter baumannii RES-546 that contains 5,7-di-N-acetyl-8-epipseudaminic acid
Carbohydrate Research. 2023.
V.523. 108726
. DOI: 10.1016/j.carres.2022.108726
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15
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Kasimova A.A.
, Sharar N.S.
, Ambrose S.J.
, Knirel Y.A.
, Shneider M.M.
, Timoshina O.Y.
, Popova A.V.
, Perepelov A.V.
, Dmitrenok A.S.
, Hsu L.Y.
, Hall R.M.
, Kenyon J.J.
The Acinetobacter baumannii K70 and K9 capsular polysaccharides consist of related K-units linked by the same Wzy polymerase and cleaved by the same phage depolymerases
Microbiology spectrum. 2023.
V.11. N6. e03025-23
. DOI: 10.1128/spectrum.03025-23
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16
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Kasimova A.A.
, Dudnik A.G.
, Shashkov A.S.
, Shneider M.M.
, Christofferson A.
, Shelenkov A.A.
, Mikhailova Y.V.
, Kenyon J.J.
, Knirel Y.A.
The K218 capsular polysaccharide produced by Acinetobacter baumannii isolate 52-249 includes 5,7-di-N-acetylpseudaminic acid linked by a KpsS3 glycosyltransferase
International Journal of Biological Macromolecules. 2022.
V.218. P.310-316. DOI: 10.1016/j.ijbiomac.2022.07.135
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17
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Drobiazko A.Y.
, Kasimova А.A.
, Evseev P.V.
, Shneider M.M.
, Klimuk E.I.
, Shashkov A.S.
, Dmitrenok A.S.
, Chizhov A.O.
, Slukin P.V.
, Skryabin Y.P.
, Volozhantsev N.V.
, Miroshnikov K.A.
, Knirel Y.A.
, Popova A.V.
Capsule-Targeting Depolymerases Derived from Acinetobacter baumannii Prophage Regions
International Journal of Molecular Sciences. 2022.
V.23. N9. 4971
. DOI: 10.3390/ijms23094971
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18
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Rudenko N.
, Karatovskaya A.
, Zamyatina A.
, Shepelyakovskaya A.
, Semushina S.
, Brovko F.
, Shpirt A.
, Torgov V.
, Kolotyrkina N.
, Zinin A.
, Kasimova A.
, Perepelov A.
, Shneider M.
, Knirel Y.
Immune Response to Conjugates of Fragments of the Type K9 Capsular Polysaccharide of Acinetobacter baumannii with Carrier Proteins
Microbiology spectrum. 2022.
V.10. N5. e01674-22
. DOI: 10.1128/spectrum.01674-22
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19
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Perepelov A.V.
, Sokolova D.S.
, Tourova T.P.
, Shashkov A.S.
, Kasimova A.A.
, Nazina T.N.
Structure elucidation and gene cluster annotation of the O-antigen of Halomonas titanicae TAT1 containing three residues of 2,3-diacetamido-2,3-dideoxy-D-glucuronic acid
Carbohydrate Research. 2022.
V.521. 108650
. DOI: 10.1016/j.carres.2022.108650
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20
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Kasimova A.A.
, Shneider M.M.
, Edelstein M.V.
, Dzhaparova A.A.
, Shashkov A.S.
, Knirel Y.A.
, Kenyon J.J.
Structure of the K98 capsular polysaccharide from Acinetobacter baumannii REV-1184 containing a cyclic pyruvic acid acetal
International Journal of Biological Macromolecules. 2022.
V.218. P.447-455. DOI: 10.1016/j.ijbiomac.2022.07.136
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