Science activity
Articles (99) More info
| 1 |
Filatov A.V.
, Shneider M.M.
, Shpirt A.M.
, Perepelov A.V.
, Dmitrenok A.S.
, Toukach P.V.
, Knirel Y.A.
Structure and gene cluster of the capsular polysaccharide produced by Acinetobacter baumannii K111 Carbohydrate Research. 2026. V.559. 109760 . DOI: 10.1016/j.carres.2025.109760 WOS Scopus OpenAlex |
| 2 |
Filatov A.V.
, Shpirt A.M.
, Perepelov A.V.
, Dmitrenok A.S.
, Shneider M.M.
, Avdeeva V.A.
, Toukach P.V.
, Knirel Y.A.
Structure and gene cluster of the capsular polysaccharide of Acinetobacter baumannii K223 Carbohydrate Research. 2026. V.563. 109846 . DOI: 10.1016/j.carres.2026.109846 WOS Scopus OpenAlex |
| 3 |
Perepelov A.V.
, Kasimova A.A.
, Filatov A.V.
, Toukach P.V.
, Babich T.L.
, Popova N.M.
, Krivonos D.V.
, Safonov A.V.
Structure elucidation and gene cluster annotation of the O-antigen of Stutzerimonas chloritidismutans NP21570 with 2-acetamido-2-deoxy-D-mannuronic acid Carbohydrate Research. 2026. V.567. 109993 . DOI: 10.1016/j.carres.2026.109993 WOS Scopus OpenAlex |
| 4 |
Shpirt A.M.
, Serpokrylov Z.V.
, Perepelov A.V.
, Dmitrenok A.S.
, Shneider M.M.
, Popova A.V.
, Toukach P.V.
, Knirel Y.A.
Structure and gene cluster of the capsular polysaccharide of Acinetobacter baumannii K104 Carbohydrate Research. 2026. V.559. 109745 . DOI: 10.1016/j.carres.2025.109745 WOS Scopus OpenAlex |
| 5 |
Toukach P.V.
, Smirnova N.S.
, Zdorovenko E.L.
, Egorova K.S.
Revealing structure-reporting patterns of pyruvylation effects on 13C NMR chemical shifts in natural saccharides Analytical Chemistry. 2026. V.98. N15. P.10988–10996. DOI: 10.1021/acs.analchem.5c06483 WOS Scopus OpenAlex |
| 6 |
Sigida E.N.
, Toukach P.V.
, Zdorovenko E.L.
, Dmitrenok A.S.
, Kuzina M.S.
, Konnova S.A.
, Fedonenko Y.P.
Structure of the O-specific polysaccharide from the lipopolysaccharide of Azospirillum brasilense KR77 Carbohydrate Research. 2026. V.567. 109988 . DOI: 10.1016/j.carres.2026.109988 WOS Scopus OpenAlex |
| 7 |
Toukach P.
Carbohydrate Structure Database: current state and recent developments Analytical and Bioanalytical Chemistry. 2025. V.417. P.1025–1034. DOI: 10.1007/s00216-024-05383-w WOS Scopus OpenAlex |
| 8 |
Toukach P.V.
, Arakelyan L.A.
, Egorova K.S.
, Ananikov V.P.
ILToxDB: A Database on Cytotoxicity of Ionic Liquids Environmental Science & Technology Letters. 2025. V.12. N12. P.1631–1635. DOI: 10.1021/acs.estlett.5c00860 WOS Scopus OpenAlex |
| 9 |
Kazantsev K.
, Toukach P.
Remediation of the NMR data of natural glycans International Journal of Biological Macromolecules. 2024. V.282. 137042 . DOI: 10.1016/j.ijbiomac.2024.137042 WOS Scopus OpenAlex |
| 10 |
Lewis A.L.
, Toukach P.
, Bolton E.
, Chen X.
, Frank M.
, Lütteke T.
, Knirel Y.
, Schoenhofen I.
, Varki A.
, Vinogradov E.
, Woods R.J.
, Zachara N.
, Zhang J.
, Kamerling J.P.
, Neelamegham S.
Cataloging natural sialic acids and other nonulosonic acids (NulOs), and their representation using the Symbol Nomenclature for Glycans Glycobiology. 2023. V.33. N2. P.99-103. DOI: 10.1093/glycob/cwac072 WOS Scopus OpenAlex |
| 11 |
Toukach P.V.
Supplementing the Carbohydrate Structure Database with glycoepitopes Glycobiology. 2023. V.33. N7. P.528-531. DOI: 10.1093/glycob/cwad043 WOS Scopus OpenAlex |
| 12 |
Shikina E.V.
, Kovalevsky R.A.
, Shirkovskaya A.I.
, Toukach P.V.
Prospective bacterial and fungal sources of hyaluronic acid: A review Computational and Structural Biotechnology Journal. 2022. V.20. P.6214-6236. DOI: 10.1016/j.csbj.2022.11.013 WOS Scopus OpenAlex |
| 13 |
Toukach P.V.
, Egorova K.S.
Source files of the Carbohydrate Structure Database: the way to sophisticated analysis of natural glycans Scientific Data. 2022. V.9. N1. 131 . DOI: 10.1038/s41597-022-01186-9 WOS Scopus OpenAlex |
| 14 |
Toukach P.V.
, Shirkovskaya A.I.
Carbohydrate Structure Database and Other Glycan Databases as an Important Element of Glycoinformatics Russian Journal of Bioorganic Chemistry. 2022. V.48. N3. P.457-466. DOI: 10.1134/s1068162022030190 WOS Scopus OpenAlex |
| 15 |
Toukach P.V.
, Egorova K.S.
Examining the diversity of structural motifs in fungal glycome Computational and Structural Biotechnology Journal. 2022. V.20. P.5466-5476. DOI: 10.1016/j.csbj.2022.09.040 WOS Scopus OpenAlex |
| 16 |
Gannesen A.V.
, Ziganshin R.H.
, Zdorovenko E.L.
, Klimko A.I.
, Ianutsevich E.A.
, Danilova O.A.
, Tereshina V.M.
, Gorbachevskii M.V.
, Ovcharova M.A.
, Nevolina E.D.
, Martyanov S.V.
, Shashkov A.S.
, Dmitrenok A.S.
, Novikov A.A.
, Zhurina M.V.
, Botchkova E.A.
, Toukach P.V.
, Plakunov V.K.
Epinephrine extensively changes the biofilm matrix composition in Micrococcus luteus C01 isolated from human skin Frontiers in Microbiology. 2022. V.13. 1003942 . DOI: 10.3389/fmicb.2022.1003942 WOS Scopus OpenAlex |
| 17 |
Scherbinina S.I.
, Frank M.
, Toukach P.V.
Carbohydrate Structure Database oligosaccharide conformation tool Glycobiology. 2022. V.32. N6. P.460-468. DOI: 10.1093/glycob/cwac011 WOS Scopus OpenAlex |
| 18 |
Liyaskina E.V.
, Rakova N.A.
, Kitykina A.A.
, Rusyaeva V.V.
, Toukach P.V.
, Fomenkov A.
, Vainauskas S.
, Roberts R.J.
, Revin V.V.
Production and сharacterization of the exopolysaccharide from strain Paenibacillus polymyxa 2020 PLOS ONE. 2021. V.16. N7. e0253482 . DOI: 10.1371/journal.pone.0253482 WOS Scopus OpenAlex |
| 19 |
Zdorovenko E.L.
, Kadykova A.A.
, Shashkov A.S.
, Varbanets L.D.
, Bulyhina T.V.
, Toukach P.V.
Structure and Biological Properties of the O-specific Polysaccharide and Lipid a from Pantoea agglomerans P324 Microbiology. 2021. V.90. N1. P.96-105. DOI: 10.1134/s0026261721010124 WOS Scopus OpenAlex |
| 20 |
Bochkov A.Y.
, Toukach P.V.
CSDB/SNFG Structure Editor: An Online Glycan Builder with 2D and 3D Structure Visualization Journal of Chemical Information and Modeling. 2021. V.61. N10. P.4940-4948. DOI: 10.1021/acs.jcim.1c00917 WOS Scopus OpenAlex |
| 21 |
Shakhmatov E.G.
, Toukach P.V.
, Makarova E.N.
Structural studies of the pectic polysaccharide from fruits of Punica granatum Carbohydrate Polymers. 2020. V.235. 115978 . DOI: 10.1016/j.carbpol.2020.115978 WOS Scopus OpenAlex |
| 22 |
Egorova K.S.
, Smirnova N.S.
, Toukach P.V.
CSDB_GT, a curated glycosyltransferase database with close-to-full coverage on three most studied nonanimal species Glycobiology. 2020. V.31. N5. P.524-529. DOI: 10.1093/glycob/cwaa107 WOS Scopus OpenAlex |
| 23 |
Sofya I Scherbinina
, Philip V Toukach
Three-Dimensional Structures of Carbohydrates and Where to Find Them International Journal of Molecular Sciences. 2020. V.21. N20. 7702 . DOI: 10.3390/ijms21207702 WOS Scopus OpenAlex |
| 24 |
Stroylov V.
, Panova M.
, Toukach P.
Comparison of Methods for Bulk Automated Simulation of Glycosidic Bond Conformations International Journal of Molecular Sciences. 2020. V.21. N20. 7626 . DOI: 10.3390/ijms21207626 WOS Scopus OpenAlex |
| 25 |
Toukach P.V.
, Egorova K.S.
New Features of Carbohydrate Structure Database Notation (CSDB Linear), As Compared to Other Carbohydrate Notations Journal of Chemical Information and Modeling. 2020. V.60. N3. P.1276-1289. DOI: 10.1021/acs.jcim.9b00744 WOS Scopus OpenAlex |
| 26 |
Sigida E.N.
, Fedonenko Y.P.
, Shashkov A.S.
, Toukach P.V.
, Shelud'ko A.V.
, Zdorovenko E.L.
, Knirel Y.A.
, Konnova S.A.
Structural studies of O-specific polysaccharide(s) and biological activity toward plants of the lipopolysaccharide from Azospirillum brasilense SR8 International Journal of Biological Macromolecules. 2019. V.126. P.246-253. DOI: 10.1016/j.ijbiomac.2018.12.229 WOS Scopus OpenAlex |
| 27 |
Sizova O.V.
, Shashkov A.S.
, Toukach P.V.
, Knirel Y.A.
, Shaikhutdinova R.Z.
, Ivanov S.A.
, Kislichkina A.A.
, Dentovskaya S.V.
Structure elucidation and gene cluster characterization of the O-antigen of Yersinia kristensenii С-134 Carbohydrate Research. 2019. V.481. P.9-15. DOI: 10.1016/j.carres.2019.06.001 WOS Scopus OpenAlex |
| 28 |
Egorova K.S.
, Knirel Y.A.
, Toukach P.V.
Expanding CSDB_GT glycosyltransferase database with Escherichia coli Glycobiology. 2019. V.29. N4. P.285-287. DOI: 10.1093/glycob/cwz006 WOS Scopus OpenAlex |
| 29 |
Sizova O.V.
, Shashkov A.S.
, Dmitrenok A.S.
, Toukach P.V.
, Knirel Y.A.
, Shaikhutdinova R.Z.
, Ivanov S.A.
, Kislichkina A.A.
, Bogun A.G.
, Dentovskaya S.V.
Structure and gene cluster of the O-polysaccharide of Yersinia rohdei H274-36/78 International Journal of Biological Macromolecules. 2019. V.122. P.555-561. DOI: 10.1016/j.ijbiomac.2018.10.189 WOS Scopus OpenAlex |
| 30 |
Neelamegham S.
, Aoki-Kinoshita K.
, Bolton E.
, Frank M.
, Lisacek F.
, Lütteke T.
, O’Boyle N.
, Packer N.
, Stanley P.
, Toukach P.
, Varki A.
, Woods R.J.
, Darvill A.
, Dell A.
, Henrissat B.
, Bertozzi C.
, Hart G.
, Narimatsu H.
, Freeze H.
, Yamada I.
, Paulson J.
, Prestegard J.
, Marth J.
, Vliegenthart J.F.G.
, Etzler M.
, Aebi M.
, Kanehisa M.
, Taniguchi N.
, Edwards N.
, Rudd P.
, Seeberger P.
, Mazumder R.
, Ranzinger R.
, Cummings R.
, Schnaar R.
, Perez S.
, Kornfeld S.
, Kinoshita T.
, York W.
, Knirel Y.
Updates to the Symbol Nomenclature for Glycans guidelines Glycobiology. 2019. V.29. N9. P.620-624. DOI: 10.1093/glycob/cwz045 WOS Scopus OpenAlex |
| 31 |
Egorova K.S.
, Toukach P.V.
Glycoinformatics: Bridging Isolated Islands in the Sea of Data Angewandte Chemie International Edition. 2018. V.57. N46. P.14986-14990. DOI: 10.1002/anie.201803576 WOS Scopus OpenAlex |
| 32 |
Alocci D.
, Suchánková P.
, Costa R.
, Hory N.
, Mariethoz J.
, Vařeková R.S.
, Toukach P.
, Lisacek F.
SugarSketcher: Quick and Intuitive Online Glycan Drawing Molecules. 2018. V.23. N12. 3206 . DOI: 10.3390/molecules23123206 WOS Scopus OpenAlex |
| 33 |
Chernyshov I.Y.
, Toukach P.V.
REStLESS: automated translation of glycan sequences from residue-based notation to SMILES and atomic coordinates Bioinformatics. 2018. V.34. N15. P.2679-2681. DOI: 10.1093/bioinformatics/bty168 WOS Scopus OpenAlex |
| 34 |
Kapaev R.R.
, Toukach P.V.
GRASS: semi-automated NMR-based structure elucidation of saccharides Bioinformatics. 2017. V.34. N6. P.957-963. DOI: 10.1093/bioinformatics/btx696 WOS Scopus OpenAlex |
| 35 |
Egorova K.S.
, Toukach P.V.
CSDB_GT: a new curated database on glycosyltransferases Glycobiology. 2017. V.27. N4. P.285-290. DOI: 10.1093/glycob/cww137 WOS Scopus OpenAlex |
| 36 |
Toukach P.V.
, Egorova K.S.
Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts Nucleic Acids Research. 2016. V.44. ND1. P.D1229-D1236. DOI: 10.1093/nar/gkv840 WOS Scopus OpenAlex |
| 37 |
Kapaev R.R.
, Toukach P.V.
Simulation of 2D NMR Spectra of Carbohydrates Using GODESS Software Journal of Chemical Information and Modeling. 2016. V.56. N6. P.1100-1104. DOI: 10.1021/acs.jcim.6b00083 WOS Scopus OpenAlex |
| 38 |
Egorova K.S.
, Toukach P.V.
Carbohydrate Structure Database (CSDB): Examples of Usage In compilation A Practical Guide to Using Glycomics Databases. – Springer Tokyo., 2016. – C.75-113. – ISBN 978-4-431-56454-6. DOI: 10.1007/978-4-431-56454-6_5 OpenAlex |
| 39 |
Egorova K.S.
, Kalinchuk N.A.
, Knirel Y.A.
, Toukach P.V.
Carbohydrate Structure Database (CSDB): new features Russian Chemical Bulletin. 2015. V.64. N5. P.1205-1210. DOI: 10.1007/s11172-015-1003-6 WOS Scopus OpenAlex |
| 40 |
Varki A.
, Cummings R.D.
, Aebi M.
, Packer N.H.
, Seeberger P.H.
, Esko J.D.
, Stanley P.
, Hart G.
, Darvill A.
, Kinoshita T.
, Prestegard J.J.
, Schnaar R.L.
, Freeze H.H.
, Marth J.D.
, Bertozzi C.R.
, Etzler M.E.
, Frank M.
, Vliegenthart J.F.
, Lütteke T.
, Perez S.
, Bolton E.
, Rudd P.
, Paulson J.
, Kanehisa M.
, Toukach P.
, Aoki-Kinoshita K.F.
, Dell A.
, Narimatsu H.
, York W.
, Taniguchi N.
, Kornfeld S.
Symbol Nomenclature for Graphical Representations of Glycans Glycobiology. 2015. V.25. N12. P.1323-1324. DOI: 10.1093/glycob/cwv091 WOS Scopus OpenAlex |
| 41 |
Lebedeva V.S.
, Karmova F.M.
, Toukach F.V.
, Mironov A.F.
Synthesis of donor–acceptor systems based on the derivatives of chlorophyll a and [60]fullerene Mendeleev Communications. 2015. V.25. N1. P.32-33. DOI: 10.1016/j.mencom.2015.01.011 WOS Scopus OpenAlex |
| 42 |
Ranzinger R.
, Aoki-Kinoshita K.F.
, Campbell M.P.
, Kawano S.
, Lütteke T.
, Okuda S.
, Shinmachi D.
, Shikanai T.
, Sawaki H.
, Toukach P.
, Matsubara M.
, Yamada I.
, Narimatsu H.
GlycoRDF: an ontology to standardize glycomics data in RDF Bioinformatics. 2015. V.31. N6. P.919-925. DOI: 10.1093/bioinformatics/btu732 WOS Scopus OpenAlex |
| 43 |
Egorova K.S.
, Kondakova A.N.
, Toukach P.V.
Carbohydrate Structure Database: tools for statistical analysis of bacterial, plant and fungal glycomes Database. 2015. V.2015. bav073 . DOI: 10.1093/database/bav073 WOS Scopus OpenAlex |
| 44 |
Grin M.A.
, Toukach P.V.
, Tsvetkov V.B.
, Reshetnikov R.I.
, Kharitonova O.V.
, Kozlov A.S.
, Krasnovsky A.A.
, Mironov A.F.
Bacteriochlorin-containing triad: Structure and photophysical properties Dyes and Pigments. 2015. V.121. P.21-29. DOI: 10.1016/j.dyepig.2015.04.034 WOS Scopus OpenAlex |
| 45 |
Kapaev R.R.
, Toukach P.V.
Improved Carbohydrate Structure Generalization Scheme for 1H and 13C NMR Simulations Analytical Chemistry. 2015. V.87. N14. P.7006-7010. DOI: 10.1021/acs.analchem.5b01413 WOS Scopus OpenAlex |
| 46 |
Toukach P.V.
, Egorova K.S.
Bacterial, Plant, and Fungal Carbohydrate Structure Databases: Daily Usage In compilation Glycoinformatics. – Humana New York, NY., 2015. – C.55-85. – ISBN 978-1-4939-2343-4. DOI: 10.1007/978-1-4939-2343-4_5 OpenAlex |
| 47 |
Shakhmatov E.G.
, Toukach P.V.
, Michailowa Е.А.
, Makarova E.N.
Structural studies of arabinan-rich pectic polysaccharides from Abies sibirica L. Biological activity of pectins of A. sibirica Carbohydrate Polymers. 2014. V.113. P.515-524. DOI: 10.1016/j.carbpol.2014.07.037 WOS Scopus OpenAlex |
| 48 |
Katayama T.
, Wilkinson M.D.
, Aoki-Kinoshita K.F.
, Kawashima S.
, Yamamoto Y.
, Yamaguchi A.
, Okamoto S.
, Kawano S.
, Kim J.D.
, Wang Y.
, Wu H.
, Kano Y.
, Ono H.
, Bono H.
, Kocbek S.
, Aerts J.
, Akune Y.
, Antezana E.
, Arakawa K.
, Aranda B.
, Baran J.
, Bolleman J.
, Bonnal R.J.P.
, Buttigieg P.L.
, Campbell M.P.
, Chen Y.A.
, Chiba H.
, Cock P.J.A.
, Cohen K.B.
, Constantin A.
, Duck G.
, Dumontier M.
, Fujisawa T.
, Fujiwara T.
, Goto N.
, Hoehndorf R.
, Igarashi Y.
, Itaya H.
, Ito M.
, Iwasaki W.
, Kalaš M.
, Katoda T.
, Kim T.
, Kokubu A.
, Komiyama Y.
, Kotera M.
, Laibe C.
, Lapp H.
, Lütteke T.
, Marshall M.S.
, Mori T.
, Mori H.
, Morita M.
, Murakami K.
, Nakao M.
, Narimatsu H.
, Nishide H.
, Nishimura Y.
, Nystrom-Persson J.
, Ogishima S.
, Okamura Y.
, Okuda S.
, Oshita K.
, Packer N.H.
, Prins P.
, Ranzinger R.
, Rocca-Serra P.
, Sansone S.
, Sawaki H.
, Shin S.H.
, Splendiani A.
, Strozzi F.
, Tadaka S.
, Toukach P.
, Uchiyama I.
, Umezaki M.
, Vos R.
, Whetzel P.L.
, Yamada I.
, Yamasaki C.
, Yamashita R.
, York W.S.
, Zmasek C.M.
, Kawamoto S.
, Takagi T.
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains Journal of Biomedical Semantics. 2014. V.5. N1. 5 . DOI: 10.1186/2041-1480-5-5 WOS Scopus OpenAlex |
| 49 |
Kapaev R.R.
, Egorova K.S.
, Toukach P.V.
Carbohydrate Structure Generalization Scheme for Database-Driven Simulation of Experimental Observables, Such as NMR Chemical Shifts Journal of Chemical Information and Modeling. 2014. V.54. N9. P.2594-2611. DOI: 10.1021/ci500267u WOS Scopus OpenAlex |
| 50 |
Shakhmatov E.G.
, Toukach P.V.
, Kuznetsov S.P.
, Makarova E.N.
Structural characteristics of water-soluble polysaccharides from Heracleum sosnowskyi Manden Carbohydrate Polymers. 2014. V.102. P.521-528. DOI: 10.1016/j.carbpol.2013.12.001 WOS Scopus OpenAlex |
Identifiers
ORCID:
0000-0001-9887-8919
ResearcherID:
N-9822-2014
Scopus ID:
7003922121
Elibrary ID:
93738
Google scholar:
IoBAR_AAAAAJ
Degrees
2019 - Dr.Sc.
2001 - Ph.D.
Academic titles
2010 - Associate professor